dc0d3e4b3ff437d8c4b9b242cc201227 *DESCRIPTION
eb6c022f2cae176dfd83e0a731e7de2b *NAMESPACE
2e35b8d88bf507ed8bf33a580f720040 *NEWS.md
fa9fa41e372833bcbdf11a021cb792f4 *R/data.R
7771e21c17484efe8784c27893f5b959 *R/dimensionality_reduction.R
871f050e30b860fe1c011bc12a0ba4ee *R/dummy_proofing.R
b0b114fa9139e4b90ff4de757178e8b4 *R/dynwrap_integration.R
d361aadf558f4bab012a6060cba3e50f *R/extract_modules.R
0370ccaee9804d813336f96de293e3fd *R/gene_importances.R
f43cf0aa0b11dedc239d099726ee11b6 *R/package.R
77925daee369db41c3d3048b2f6e3595 *R/plotting.R
cd2a9d1fc36cb2e19ec16192d2a31e86 *R/scaling.R
0bb9b3bf795845a68dd137b660842b00 *R/trajectory_inference.R
24c054746c7c5ed96f6dccc3207a2774 *README.md
7f2094c7b4d5faa522b624cffc621f8b *build/partial.rdb
89bfc3dcd805f601fd2e09848172b529 *build/vignette.rds
185be754adfcb71888fee9c4575e1253 *data/ginhoux.rda
f23995f38dfef1043accefe6bc0d1fda *inst/CITATION
c401894a4c129fcc16c9441b8602d868 *inst/doc/anndata.R
ac8c54416a09343913b3af309cc76f7b *inst/doc/anndata.Rmd
18fd66fdddbd96e40b6f479c949af675 *inst/doc/anndata.html
477737af112278504ec840a8a1710a95 *inst/doc/ginhoux.R
184abad7127b1ba0a711128a7656209b *inst/doc/ginhoux.Rmd
5a7b9885d10e1ec08368c74558f5c131 *inst/doc/ginhoux.html
98b3b15842c4db6d03c0bd930162c904 *inst/doc/simulated-data.R
3d792e877a2c5832d1f35d04c8095183 *inst/doc/simulated-data.Rmd
fa9549577814bd69ed47fbfb94872c32 *inst/doc/simulated-data.html
cb660694a829173e816ce8ab40a0679a *inst/doc/singlecellexperiment.R
81c49904a18ee10607181bdd7c6a1d08 *inst/doc/singlecellexperiment.Rmd
d45379f999425117612d46d7e2e32de4 *inst/doc/singlecellexperiment.html
233829c5e085e9769d6779e960854710 *inst/dynwrap/definition.yml
5b3eb3bbf40c59118bf6a585ea08e819 *inst/dynwrap/example.sh
2f806d801665a295897ca6a1025be6ec *inst/dynwrap/run.R
fdd4d33886d14538f2a367caf6aeca45 *man/SCORPIUS-package.Rd
736c14cb90ced6b020b25c5fc77496ed *man/draw_trajectory_heatmap.Rd
d9f9a6ccbb839872a5bb99eb570cfc41 *man/draw_trajectory_plot.Rd
9c3b29be8ca27997f953aa6fed8db7cf *man/extract_modules.Rd
9e4f5d2ddda83e257223749bbf7eb67e *man/figures/README_infer_trajectory-1.png
07d2aac12a21bff67b4ff1ea61b7773e *man/figures/README_moduled_tafs-1.png
6dfa77928b58fe8a3cf76709ee2435e2 *man/figures/README_reduce_dimensionality-1.png
55a00ad28135a933090618ea254848e0 *man/figures/README_visualise_tafs-1.png
e9b6e9d2527a523f5558176b71918fd8 *man/gene_importances.Rd
d037b7b94de273a2e34628b300aafa56 *man/generate_dataset.Rd
c4057d0d110cd024229f593bbb0493b3 *man/ginhoux.Rd
dfabd167f7ff582b345fbb009e055dfa *man/infer_initial_trajectory.Rd
67510992f34b214bc3a7138b06a9c439 *man/infer_trajectory.Rd
ecbcc6bcc735dc38ce4cb56a27d8c4a1 *man/reduce_dimensionality.Rd
30e654062ffb1cf588c51240c2b58a35 *man/reexports.Rd
e75c1f76077640b194ae4f45d4923525 *man/reverse_trajectory.Rd
85ef7034f28aff2b993f4c66944a376b *man/ti_scorpius.Rd
1c338a94cafdfebbdf03b4b6696b8d48 *tests/testthat.R
276a19b256538cad18a3cfc465f072ac *tests/testthat/test-data.R
52954f7529ea5c42f6f119681dfcf729 *tests/testthat/test-dimensionality_reduction.R
0cd7ab7adc02c603b31021751a43843a *tests/testthat/test-extract_modules.R
c7342997c645f4a1201e6997b3783d5b *tests/testthat/test-gene_importances.R
77a519a537a6ef6815d72b3bb4fe5721 *tests/testthat/test-scaling.R
89afdff50bc3d74aff13f34ae2a85b04 *tests/testthat/test-sparse.R
1b55d9ce933c1f9b7763fff4eef2d371 *tests/testthat/test-trajectory_inference.R
ac8c54416a09343913b3af309cc76f7b *vignettes/anndata.Rmd
184abad7127b1ba0a711128a7656209b *vignettes/ginhoux.Rmd
3d792e877a2c5832d1f35d04c8095183 *vignettes/simulated-data.Rmd
81c49904a18ee10607181bdd7c6a1d08 *vignettes/singlecellexperiment.Rmd
