Last updated on 2025-11-15 07:50:11 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 11.86 | 248.50 | 260.36 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.39 | 287.72 | 298.11 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 26.00 | 332.49 | 358.49 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.43 | 249.95 | 264.38 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.20 | 270.07 | 284.27 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 177.00 | 189.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 189.00 | 199.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 230.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/127s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.667, system: 0.062, elapsed: 2.150 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.521, system: 0.064, elapsed: 8.946 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.173, system: 0.011, elapsed: 0.189 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.064, system: 0.261, elapsed: 5.993 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.006, elapsed: 0.227 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.156, system: 0.431, elapsed: 18.268 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.768, system: 0.078, elapsed: 2.266 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.515, system: 0.240, elapsed: 11.115 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.016, elapsed: 0.276 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.299, system: 0.313, elapsed: 6.310 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.007, elapsed: 0.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.531, system: 0.694, elapsed: 21.039 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.811, system: 0.084, elapsed: 2.488 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.712, system: 0.206, elapsed: 13.812 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.011, elapsed: 0.359 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.962, system: 0.176, elapsed: 7.019 seconds]
Computing values for grid cells...
... done. [user: 0.202, system: 0.016, elapsed: 0.340 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.335, system: 0.275, elapsed: 1.579 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.882, system: 0.808, elapsed: 26.617 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.666, system: 0.042, elapsed: 3.020 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.583, system: 0.090, elapsed: 16.677 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.604 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.011, system: 0.170, elapsed: 11.531 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.004, elapsed: 0.316 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.818, system: 0.463, elapsed: 18.817 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.140, system: 0.802, elapsed: 52.362 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/138s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.833, system: 0.101, elapsed: 2.813 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.840, system: 0.318, elapsed: 14.702 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.020, elapsed: 0.272 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.008, system: 0.312, elapsed: 5.894 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.014, elapsed: 0.229 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.613, system: 0.803, elapsed: 24.784 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.836, system: 0.090, elapsed: 2.318 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.891, system: 0.327, elapsed: 14.289 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.015, elapsed: 0.404 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.853, system: 0.193, elapsed: 6.985 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.240 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.505, system: 0.666, elapsed: 25.129 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.633, system: 0.043, elapsed: 2.797 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.603, system: 0.124, elapsed: 18.853 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.012, elapsed: 0.379 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.741, system: 0.184, elapsed: 7.241 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.332 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.075, system: 0.247, elapsed: 1.147 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.067, system: 0.644, elapsed: 32.032 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.646, system: 0.042, elapsed: 2.985 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.592, system: 0.085, elapsed: 16.904 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.297 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.736, system: 0.168, elapsed: 5.702 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.289 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.648, system: 0.469, elapsed: 19.970 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.641, system: 0.802, elapsed: 47.327 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64